This is taken from commit #a278c9cb246fc267f93018e607856c1141942d32 from ODU container repo. No changes were made at all.master
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#!/bin/bash |
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# |
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# 20210401 - First version, forked off nwbuild03-ARMCI-MPI.sh |
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# 20210407 - Updated to use basic compiler insteead of MPI wrapper |
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source /etc/container_runtime/buildtime |
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# WORK_DIR=$(mktemp -d /tmp/install.XXXX) |
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# cd $WORK_DIR |
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load_mpich |
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# nwchem build system requires basic compilers instead of mpiXXX compiler wrapper |
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load_conda |
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export CC=x86_64-conda_cos6-linux-gnu-gcc |
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export CXX=x86_64-conda_cos6-linux-gnu-g++ |
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export FC=x86_64-conda_cos6-linux-gnu-gfortran |
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export NWCHEM_TOP=/opt/nwchem.build04c |
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export NWCHEM_MODULES="all python" |
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export NWCHEM_TARGET=LINUX64 |
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COMPILER_DIR=$NWCHEM_TOP/compilers |
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mkdir -p $COMPILER_DIR |
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if ! test -e $COMPILER_DIR/gcc; then ln -sf $(which $CC) $COMPILER_DIR/gcc; fi |
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if ! test -e $COMPILER_DIR/g++; then ln -sf $(which $CXX) $COMPILER_DIR/g++; fi |
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if ! test -e $COMPILER_DIR/gfortran; then ln -sf $(which $FC) $COMPILER_DIR/gfortran; fi |
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# Make this THE path to find gcc, g++, and gfortran: |
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PATH=$COMPILER_DIR:$PATH |
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# Override the compiler's names to point to the CONDA-provided toolchains |
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export CC=gcc |
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export CXX=g++ |
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export FC=gfortran |
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echo PATH=$PATH |
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test -d $NWCHEM_TOP/src || lazy_unarchive $NWCHEM_TOP /cm/shared/containers/srcs/nwchem/v7.0.0-release.tar.gz 1 |
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test -d $NWCHEM_TOP/src/tools/ga-5.7.1 || lazy_unarchive $NWCHEM_TOP/src/tools /cm/shared/containers/srcs/nwchem/ga-5.7.1.tar.gz |
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# scale down: do not use external LAPACK or BLAS |
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export USE_MPI=y |
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export USE_NOIO=y |
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export USE_SCALAPACK=n |
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export USE_PYTHON64=y |
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# FORCE: |
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export USE_INTERNALBLAS=y |
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export ARMCI_NETWORK=ARMCI |
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export SCALAPACK_SIZE=8 |
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export BLAS_SIZE=8 |
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#export SCALAPACK="-lmkl_scalapack_ilp64 -lmkl_gf_ilp64 -lmkl_gnu_thread -lmkl_core -lmkl_blacs_intelmpi_ilp64 -lgomp -lpthread -lm -ldl" |
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#export SCALAPACK_LIB="$SCALAPACK" |
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#export BLASOPT="-lmkl_gf_ilp64 -lmkl_gnu_thread -lmkl_core -lgomp -lpthread -lm -ldl" |
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#export LAPACK_LIB=$BLASOPT |
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export PYTHONHOME=/opt/conda |
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export PYTHONVERSION=2.7 |
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unset CFLAGS |
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unset CXXFLAGS |
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unset CPPFLAGS |
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unset FCFLAGS |
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unset FFLAGS |
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export LDFLAGS="-L /opt/conda/lib" # -L /opt/armci-mpi/lib" |
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#export CFLAGS="-I /opt/armci-mpi/include" |
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#export CXXFLAGS="-I /opt/armci-mpi/include" |
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# https://wiki.mpich.org/armci-mpi/index.php/NWChem |
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#export EXTERNAL_ARMCI_PATH=/opt/nwchem.ARMCI/external-armci # /armci-mpi |
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# without -lpthread it failed to detect armci |
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# Hack the link option so that libpthread is included after armci |
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export EXTERNAL_ARMCI_PATH="/opt/armci-mpi\\ -larmci\\ -lpthread" |
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# Not needed anymore: |
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#export PATH=/opt/conda/bin:$PATH |
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cd /opt/conda/bin |
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ln -s python-config python2.7-config |
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cd $NWCHEM_TOP/src |
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make nwchem_config |
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# Not needed anymore: |
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#sed -i config/makefile.h \ |
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# -e 's:-i8:-fdefault-integer-8:' |
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echo "Compiler locations:" |
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echo "CC = $CC => $(which $CC)" |
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echo "FC = $FC => $(which $FC)" |
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echo "PATH = $PATH" |
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make |
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